Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06] 54,736 sequences; 1,105,676,412 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq797 96.9 4e-15 >seq797 Length=179301 Score = 96.9 bits (106), Expect = 4e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 ||||||||||| || ||||||||||||||||| ||||| ||||| || || |||||| Sbjct 59807 AGCTGTTTCCTGCTGTGCATGAAGGATGACAGCATCGAGGGGATCTATGACACCCTCAAG 59866 Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG 19350 |||| || | ||||||||||| ||||||| ||||| Sbjct 59867 CAGTGTGCCCTCATCTCCAAGTCTGCCGGGGGCATCGG 59904 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713 ||||||||||||| ||||||||||| | || |||| |||||| || || ||||| ||| Sbjct 59904 CCGATGCCCCCGGCAGACTTGGAGATGAGGGCACACTGCTTGAGGGTGTCATAGATCCCC 59845 Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCT 79751 ||||| ||| |||||||| | |||||| ||||| Sbjct 59844 TCGATGCTGTCATCCTTCATGCACAGCAGGAAACAGCT 59807 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 79098 CTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCT 79157 ||| | |||||||||||| | || |||||||||||| | ||||| ||||||||| Sbjct 68269 CTCCACGATTTCTGTGCAGAGGTTGCTGCTCTTGATGGTGCCCAGGTTCTGCTGGTTGCT 68210 Query 79158 CTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTC 79205 ||| ||| |||| ||||||||| |||||| || ||||| ||||| Sbjct 68209 CTTGCGGTTGCAGGAATCCTTGTAGAGCATGTAGGGAGTCCCAGTCTC 68162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548149499331840