Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq1390 104 2e-17
seq2435 96.9 3e-15
>seq1390
Length=4484455
Score = 104 bits (114), Expect = 2e-17
Identities = 107/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || ||||| |||||||||||||| |||||||| | || || || |||||||||
Sbjct 3696718 GTGGTGGAGGAGCTTTTCCGAGATGGGGTTAACTGGGGCAGGATCGTGGCCTTCTTTGAG 3696777
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
||||| || || ||||| ||||| |||||||| | | || |||| || |||| |
Sbjct 3696778 TTTGGCGGCGTGATGTGCGTGGAGAGCGTCAACCGGGAGATGTTTCCCCTTGTGGACAGC 3696837
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| || || |||||||| ||
Sbjct 3696838 ATCGCTGCCTGGATGACCGA 3696857
>seq2435
Length=9698745
Score = 96.9 bits (106), Expect = 3e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|||||||| | || |||||||||||||| | || |||||||| | || |||||
Sbjct 8901831 AGCCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATGTTGAAAGGC 8901772
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| ||||| ||||| ||| | || ||||| || | ||||||||| | || || | | |
Sbjct 8901771 ACTCCCAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATCTAGA 8901712
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694
||||| ||||| | | | ||| |||||||||| | ||||
Sbjct 8901711 ACATAGAACTGGCAAAGGGCGTGGCATGGAGGCAAAGCCAT 8901671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414200304599104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |