Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calypte_20anna_20[refseq_20GCF_5F000699085.1_202014-06-06]
54,736 sequences; 1,105,676,412 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq3828 102 1e-16
seq325 98.7 1e-15
seq797 93.3 6e-14
>seq3828
Length=4044606
Score = 102 bits (112), Expect = 1e-16
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| ||||| | ||| || || || || || |||||||| || || | ||| ||
Sbjct 1121706 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCTCTCTTCTTC 1121765
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
| |||||||||||| || || || || || ||||| |||||||| ||||| || || ||
Sbjct 1121766 AACCAAAATATAGCAGCAAAGGAACCTGAGAAGAAGATGCCTTCAACAGCAGCAAAGGCA 1121825
Query 46774 ACAAGTCTCTCTCC 46787
|| | |||||| ||
Sbjct 1121826 ACCACTCTCTCACC 1121839
>seq325
Length=5823465
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
||||||||||| || | ||| |||||||| || || |||||||| | ||| | || ||
Sbjct 5212134 TCATCTCTACTGATGAGTTCATTAGAAAAAGTCAGTCCAGGCATCAATCCTCTTTTCTTC 5212193
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
|||||||| || | || ||||| ||||||||||| || ||||| || || || || ||
Sbjct 5212194 AGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 5212253
Query 46774 ACAAGTCTCTCTCC 46787
|| | || |||||
Sbjct 5212254 ACTACTCGTTCTCC 5212267
Score = 96.9 bits (106), Expect = 5e-15
Identities = 82/100 (82%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 46319 CTTGTGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTT 46378
|||| ||||| |||||||| | || ||||||||||| | |||||| || ||||| ||||
Sbjct 5210874 CTTG-GACATGACTCCCATCCTCTGATATTCACCTACTCTTTTCTCAAAGAAATTGGTTT 5210932
Query 46379 TGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATT 46418
||||||||| || || |||||||| || ||||| |||||
Sbjct 5210933 TGCCTTCCAGAGAGATGTTTTCCATGAAGTCAAAAGGATT 5210972
Score = 86.0 bits (94), Expect = 9e-12
Identities = 91/120 (76%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949
|||||| | || || || || | |||||| |||||||||||||| |||||||| || ||
Sbjct 5214170 ATCTTTGATGTAGGTGTCAATAAGAAGACTGTACATTTCTGAATGTATGTTTTCCATGGC 5214229
Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009
||||| || || || ||||| | ||||| || | ||||| ||| || |||||| ||
Sbjct 5214230 AATCTGGAAGCCATAGAAACAACGCGCTTCTGTGACTTGTACTTCTTGACTAAATCGCTC 5214289
>seq797
Length=179301
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503
|||| || ||||| |||||||| || |||||| ||| | || || || || || || |
Sbjct 77319 TCCAGCCATAGAAGTGCATGCTGGTGAGTTTGCCATAGTTGGGTTCAGCAATGTGGATGT 77260
Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563
| | ||||| || || ||||||||||||||||| || || ||||| || | |||||||
Sbjct 77259 TGAGGGACTGGCTCTGGTCGATGAAAGCTCCTCTGTCCGCTGCCATCTTCAGGATGGTCT 77200
Query 75564 TTTGAGGAATTTCCCA 75579
| || | || |||||
Sbjct 77199 TCTGGGAGATCTCCCA 77184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712446610283520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |