Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq17223 98.7 9e-16 seq7229 96.9 3e-15 >seq17223 Length=94229 Score = 98.7 bits (108), Expect = 9e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| || || || || || || || || || || ||||| || || | || || Sbjct 11066 TCATCTCTGCTAATGAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 11007 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGC 13293 | |||||| ||||||||||| ||||||||||| || || ||||||||||| ||||| || Sbjct 11006 AGCCAAAAAATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGC 10948 >seq7229 Length=62315 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| || || || || || |||||||| || || ||||| | |||| ||| || Sbjct 2446 TCATCTCTGCTGATGAGTTCATTAGAAAATGTGAGTCCAGGCATTAATCCTCTTTTCTTC 2387 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | |||||| || | ||||| || || ||||| || |||||||| ||||||||||| ||| Sbjct 2386 AGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 2327 Query 13295 A 13295 | Sbjct 2326 A 2326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430701522574548