Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq26086 111 1e-19 >seq26086 Length=12707 Score = 111 bits (122), Expect = 1e-19 Identities = 138/184 (75%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| || | |||||||||||| || || || ||||| | || Sbjct 2046 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATC 1987 Query 25833 TCCATCTTCCCTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || || || ||| |||| ||| ||| |||||||| || || | || ||||| || | Sbjct 1986 CCCTTCCTCTCTGGTGCTGAAA-CCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 1928 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| ||||| || || || | ||||||||||||| |||||| || || || || || | Sbjct 1927 CCCAAATCTTCACACCTTTTGCAGAGAGCTCTTTGGCGTTTGTAGAACC-CT-ACAAAAC 1870 Query 25952 ACAG 25955 |||| Sbjct 1869 ACAG 1866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339915927436602