Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq10859 123 6e-23 >seq10859 Length=4031 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| ||| || ||||| || ||||||| || ||||| || ||| Sbjct 899 AGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 840 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || | || || ||||| |||||||| | ||| ||| || ||| || ||||| || Sbjct 839 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGA---TCGGGGGGAATGCCTTCCTTG 783 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| || ||||||||||| || || | || || | || || || | ||||| Sbjct 782 TCCTGGATCTTAGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATG 723 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || || |||||||| Sbjct 722 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178846176745372