Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq10859 149 7e-31 >seq10859 Length=4031 Score = 149 bits (164), Expect = 7e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | |||| ||| |||||||| || ||||| ||||| |||||||||| Sbjct 460 TGCCACCTCTCAGGCGCAGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCGG 401 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || |||||| | || || ||||||||||| || || |||| | |||||| |||| | Sbjct 400 ACAGGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGG 341 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||| | || | | ||||| || | || | Sbjct 340 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAA 281 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 | || | |||||||| ||||| ||||| || || |||||||| |||||||| Sbjct 280 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTT 229 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| ||||| | |||| ||| ||||||| ||| ||| || ||||| |||||||||| Sbjct 688 TGCCACCTCTCAGGCGCAGCACAAGATGCAGAGTAGACTCTTTCTGGATGTTGTAGTCGG 629 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | | |||||| | || || ||||||||||| || || |||| | |||||| |||| | Sbjct 628 ACAAGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGG 569 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| |||||| ||||| || | | ||||| || | || | Sbjct 568 GAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAA 509 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 508 CCTCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 460 Score = 140 bits (154), Expect = 4e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423 || || || || | ||||| ||| |||||||| || ||||| ||||| ||||||||| Sbjct 917 TTACCACCCCTCAGACGCAGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCG 858 Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483 || || |||||| | || || ||||||||||| || || |||| | |||||| |||| Sbjct 857 GACAGGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGG 798 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 || | || ||||||||| |||||| || | || | | ||||| || | || Sbjct 797 GGAATGCCTTCCTTGTCCTGGATCTTAGCTTTCACGTTCTCAATGGTGTCACTGGGCTCA 738 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 737 ACCTCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564860580522480