Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq756 111 6e-19 seq19879 104 9e-17 >seq756 Length=2765 Score = 111 bits (122), Expect = 6e-19 Identities = 279/419 (67%), Gaps = 9/419 (2%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || |||||| | | ||||| | || || ||||| | || || || || || || Sbjct 753 GGCAAGCCCAAGGTGCAAGTGGAGTACAAGGGTGAGATGAAGACCTTCTTCCCAGAGGAG 812 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || ||||| ||||| || ||||| || | || || ||| | || | | | Sbjct 813 ATCAGCTCCATGGTCCTTACCAAGATGAAGGAGATCGCTGAGGCCTATCTGGGG-CGCAA 871 Query 451313 GTTACTGA-TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 | | | || ||| || || || || || ||||| |||||||| | || || || || || Sbjct 872 GGTGCAGAATGCTGTCATCACCGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCAC 931 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 |||||||| || || |||| | ||||| | || ||||| ||||| |||||||| Sbjct 932 CAAAGATGCTGGCACCATCACTGGCCTTAATGTGATGCGTATTATCAATGAGCCTACAGC 991 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA-----ACAGAAGaaaaaaaTATT 451486 ||||||| |||| ||||| || ||| || ||| | | | | ||| || ||| | Sbjct 992 AGCTGCTATAGCCTATGG-CTTGGACAA-GAAAGGTACCCGGGCTGGAGAGAAGAATGTG 1049 Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG 451546 | | ||||| || || || || ||| |||| || | ||| | ||||| ||||| Sbjct 1050 CTCATCTTTGACTTGGGAGGGGGCACTTTTGATGTATCCATCCTTACCATTGAGGATGGA 1109 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | ||||| || ||| | || |||||||| ||||| || || || || |||| || Sbjct 1110 ATCTTTGAGGTGAAGTCCACAGCCGGTGATACCCATCTGGGTGGGGAGGACTTTGACAA 1168 Score = 89.7 bits (98), Expect = 2e-12 Identities = 114/156 (73%), Gaps = 6/156 (4%) Strand=Plus/Plus Query 451982 AAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTA 452041 |||||| | || || |||||||||||||| ||||||||||| || ||||||||||| || Sbjct 1545 AAGAGCATCAACCCCGATGAAGCTGTTGCTTATGGTGCTGCTGTGCAAGCAGCTATCCTC 1604 Query 452042 ACAGGTTCAGATGA---TGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTA 452098 | || ||| | ||| || | ||| | ||| | | ||||| || ||||| Sbjct 1605 ATGGG---AGACAAGTCTGAGAACGTGCAGGATCTGCTGCTGTTGGATGTCACCCCTCTG 1661 Query 452099 TCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACT 452134 ||||| || |||| || || |||||| |||||||| Sbjct 1662 TCTCTGGGCATTGAGACGGCCGGTGGAGTGATGACT 1697 >seq19879 Length=7372 Score = 104 bits (114), Expect = 9e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| |||| ||| | ||||| || || ||||||||||| | || || || || || Sbjct 5953 GTTACTAATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 5894 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | ||||| || |||||||| ||||| || ||||| Sbjct 5893 AAAGATGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCAACAGCT 5834 Query 451433 GCTGCTCTAGCATATGGACT 451452 ||||| |||| ||||| || Sbjct 5833 GCTGCGATAGCTTATGGTCT 5814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974364764939192