Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq19879 201 1e-46 >seq19879 Length=7372 Score = 201 bits (222), Expect = 1e-46 Identities = 372/543 (69%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| || || |||||||| || || || | || ||||| ||||| || || || Sbjct 5148 GCACCGTAAGCCACAGCCTCATCAGGATTGATACTCTTGTTCAGCTCTTTGCCATTGAAG 5207 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || || ||||| || ||||| || || || ||||| |||| ||||| Sbjct 5208 AAATCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGATG 5267 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 || | | | |||||| || | || | || || || | ||||| ||||| |||| Sbjct 5268 TCGTGGATCTGCGATTTGTCAAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGG 5327 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| | ||| || ||||| || || | ||||||||| || ||| Sbjct 5328 GTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATGGACGTGTAG 5387 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | |||||||||||||| | | || | | ||||| | Sbjct 5388 AAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGCGTGCTAGAAGACAGA 5447 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| ||||| || || || || | ||||||| || | | ||| || Sbjct 5448 GTACGCTTTGCACGCTCGCATGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCTCGCTG 5507 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 || || ||||| || || || || || || | ||||| || || | | | | Sbjct 5508 ATGTCCTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCATGCGGTT---G 5564 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || || || | ||| || |||||||| || Sbjct 5565 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 5624 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | || | || ||||| || || ||||| || |||||||| ||||| || Sbjct 5625 TCTTCAATAGTCAAAATTGACACATCGAAGGTGCCACCTCCAAGGTCAAAGATGAGAACA 5684 Query 7577 TTC 7579 ||| Sbjct 5685 TTC 5687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634708261358160