Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq10859 100 2e-16 >seq10859 Length=4031 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | || | ||| || ||||| ||||| || || ||||| |||| Sbjct 686 CCACCTCTCAGGCGCAGCACAAGATGCAGAGTAGACTCTTTCTGGATGTTGTAGTCGGAC 627 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| ||||| |||||||| |||| | ||| |||||||| ||| Sbjct 626 AAGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGGGA 567 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || ||| | || | |||||| | || || Sbjct 566 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 507 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | |||| || ||||| || | || || ||||| ||||||||| Sbjct 506 TCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 459 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | || | ||| | ||| ||||| || || || ||||| |||| Sbjct 458 CCACCTCTCAGGCGCAGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 399 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| ||||| |||||||| |||| | ||| |||||||| ||| Sbjct 398 AGGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGGGA 339 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || || | || | |||||| | || || Sbjct 338 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACC 279 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || |||||||| | || || ||||| |||||||| Sbjct 278 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 232 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299 || || || || | ||| | || | ||| | ||| ||||| || || || ||||| ||| Sbjct 917 TTACCACCCCTCAGACGCAGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCG 858 Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359 | | || | |||| |||| ||||| |||||||| |||| | ||| |||||||| Sbjct 857 GACAGGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGG 798 Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCC 101419 ||||||||||| || || || || || ||| || | || | |||||| | || Sbjct 797 GGAATGCCTTCCTTGTCCTGGATCTTAGCTTTCACGTTCTCAATGGTGTCACTGGGCTCA 738 Query 101420 ACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | |||| || ||||| || | || || ||||| ||||||||| Sbjct 737 ACCTCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396020139670218