Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq2783 217 2e-51 seq45461 102 9e-17 >seq2783 Length=61987 Score = 217 bits (240), Expect = 2e-51 Identities = 648/991 (65%), Gaps = 9/991 (1%) Strand=Plus/Plus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| || || |||| ||||| || || || |||||| || ||| || | Sbjct 50610 TGTGTCGCAAATACTCTTCCAAACATTTCACTGCAAAAGGGTCAACATCAGTGTCAAACT 50669 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| |||| ||||||| || |||||| ||| || | Sbjct 50670 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGTTCAGGTCTCCTACCCCAAAAA 50726 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | ||| || || |||| || ||||| | || ||||| | ||| | Sbjct 50727 CACAGACCGAGCGAACGTGAACTCCACTGCATGGTGGGTAGGGTGCACCTTTGGACACAT 50786 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| ||||||||||||| ||||||||||| | || | |||||| || || | Sbjct 50787 CACCTTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCGTTCATGTCAGAAACATCAT 50846 Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | ||| || || | ||| ||||| || || | || || | ||| | || |||||| Sbjct 50847 ACTTG-CCACTAGAAGAAACTGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAC 50905 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 || | || || |||||||| ||||| || | ||| || ||||||| ||| ||| Sbjct 50906 AGATACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCAATGAACTTAAGTATTTTGCTG 50965 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 | || | || | ||| | || ||||| || || || || || || Sbjct 50966 CTTTCTAATACATATTCTACAAATCTCCTGCTAACTACAAAATAGGCACTACCAGAAAAA 51025 Query 160464 ATCGGTATGGGTATAGGCGG-CGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTT 160522 || || | | ||| || ||| |||||| || ||||| | || | Sbjct 51026 ATTGGAGTACTGAGAGGTGGTAGTG-GTTTGTCTATGCCTGTGTTCTTTATTTTACCATC 51084 Query 160523 CACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTC 160582 | | | | | | || |||||||| || || | ||||| ||| || || Sbjct 51085 AATAATCTCATAGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCTGTTTC 51144 Query 160583 TAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAG 160642 | ||||| |||| | || | ||| | | || || || || |||| ||||| | Sbjct 51145 CAAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTTTAT 51204 Query 160643 CGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAG 160702 |||||||| | || || | |||||| | ||| ||||| || | || || || Sbjct 51205 AGGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAACTTCTTCTGTAGAG 51264 Query 160703 GTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTC 160762 || ||||||| ||||| ||||||||||| | |||||| ||||| || || || |||| Sbjct 51265 ATCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCATATACAACACTCTC 51324 Query 160763 TAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAA 160822 || | |||| | |||||| ||||| ||||| || || |||||| ||| | ||| || Sbjct 51325 TAACTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCCTTCACAG-CAGCAA 51383 Query 160823 GAACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGA 160881 || | || | | ||||| ||| || || | ||| || | |||||||| || |||| Sbjct 51384 AAAAAGATTCTGGAGACTTTCTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATAGA 51443 Query 160882 TGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTA 160941 | | || || | || || | |||||| || || |||| | ||| || ||||| || | Sbjct 51444 TTGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGCAA 51503 Query 160942 TCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAA 161001 | ||||| || | || || || || | | | |||||| | |||||| | | Sbjct 51504 TTGGAAATTCCGCTTCTTCATTGCTGAGAGGTTGCATAATGTACTTCCTAGTCTTGGTGA 51563 Query 161002 AATAATCACAATCCCGCGTCATGTTGATATA 161032 | | ||||||| |||||||| ||||| Sbjct 51564 AGGAGGCACAATCTGCTGTCATGTTAATATA 51594 >seq45461 Length=939 Score = 102 bits (112), Expect = 9e-17 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 160235 GTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACAT 160294 |||||||||||| || | | || | || | |||||| ||| | | | |||| | Sbjct 23 GTACTGCCACTTGACCAGGCGGGGCAGGGCGTTCATGTCCGAGAGCTGGAACTTGTCATT 82 Query 160295 CAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTC 160354 | |||| | ||| || || ||||||||||| || | ||||||||||| | ||| ||||| Sbjct 83 CTGGGGCATGGCGCCTGGCACGCCGGGCATGCGGTTGAGGGTGGCCCAGACGTGCTCGTC 142 Query 160355 GGGGCTGTACGTGTCCTTAGACCATTCCATGAAC 160388 ||||||||| |||||||| | ||| |||| |||| Sbjct 143 GGGGCTGTAGGTGTCCTTGGCCCACTCCAGGAAC 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576833372256240