Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq756 381 8e-101 seq10859 170 3e-37 seq19879 165 1e-35 seq5242 109 7e-19 >seq756 Length=2765 Score = 381 bits (422), Expect = 8e-101 Identities = 1043/1582 (66%), Gaps = 33/1582 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| || ||||| || ||||| || || ||||| | || ||| Sbjct 474 GCGATCGGCATCGACTTGGGAACGACGTACTCCTGCGTGGGTGTCTTTCAGCATGGCAAA 533 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | || ||||| || ||||| || || || ||||| ||||| || Sbjct 534 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACGCCCAGCTACGTGGCCTTCACC 593 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || || ||| | || ||||| || || || ||| ||||||||||||| || Sbjct 594 GATACAGAGCGCCTCATCGGCGATGCTGCCAAGAACCAGGTGGCTATGAACCCTACTAAC 653 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||||| || |||||||| || || ||||||| | || | || || | Sbjct 654 ACCATCTTTGATGCCAAGCGTCTCATCGGCCGCAAGTATGATGACCCCACGGTGCAGGCT 713 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | || || || || | ||||| | | | | Sbjct 714 GACATGAAGCACTGGCCCTTCCGTGTGGTGAA---TGAGGGCGGCAAGCCCAAGGTGCAA 770 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GAAGAAATTTCGTCTATGGTGTT 195657 || || | | ||||||| ||| | || |||| || || || || ||||| | Sbjct 771 GTGGAGTACAAGGGTGAGATGAAG-ACCTTCTTCCCAGAGGAGATCAGCTCCATGGTCCT 829 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | ||||||||||||| || || | | |||| | ||| | |||| || | Sbjct 830 TACCAAGATGAAGGAGATCGCTGAGGCCTATCTGGGGCGCAAGGTGCAGAATGCTGTCAT 889 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || ||||||||||||| ||| || || || ||||| || || || |||| | || Sbjct 890 CACCGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCAT 949 Query 195778 TGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | || || || ||| | | ||||||||||| || ||||| ||||| || || |||| Sbjct 950 CACTGGCCTTAA-TGTGATGCGTATTATCAATGAGCCTACAGCAGCTGCTATAGCCTATG 1008 Query 195837 GTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | |||||||||| | || | ||| || ||||| | |||||||| | || | Sbjct 1009 GCTTGGACAAGAAAGGTACCCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTGGGAG 1068 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 | || || |||||||| || | || | ||||| | ||| || || || || ||| | | Sbjct 1069 GGGGCACTTTTGATGTATCCATCCTTACCATTGAGGATGGAATCTTTGAGGTGAAGTCCA 1128 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || |||||||| ||||| ||||| || || || || || | | ||||| Sbjct 1129 CAGCCGGTGATACCCATCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATTTTG 1188 Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 || || ||| || ||| | ||| || ||| |||| || | || | | | Sbjct 1189 TGGAAGAATTCAAGCGTAAGCACAAGCGCGACATTGCTGGCAACAAGCGAGCGGTGAGGC 1248 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTC---TCTTCTACGGCTCAAACAA 196127 | || | || || ||||| | || || || |||||| ||||| ||| ||| | | Sbjct 1249 GACTGCGTACGGCTTGTGAGAGGGCAAAGCGCACTCTCAGCTCTTCCACG---CAAGCTA 1305 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 |||||||||| || | | ||| || ||||| ||||| || | ||||| ||||| | Sbjct 1306 GCATTGAGATTGACTCCCTCTATGAGGGCATTGATTTCTACACCTCCATTACTCGTGCCC 1365 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 | ||||| ||| | || ||||| | || | |||| || || || | | | Sbjct 1366 GCTTTGAGGAGCTCAATGCTGATCTCTTCCGTGGCACCCTGGAGCCAGTGGAGAAGGCTC 1425 Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | ||||| || ||| | || ||| || | | || ||||| | ||||| || || | Sbjct 1426 TGCGTGATGCCAAGCTAGACAAGGGCCAGATCCAGGAGATTGTGTTGGTGGGTGGCTCCA 1485 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367 | ||||| || ||||| ||| || ||||| |||||||||| |||||| | |||| Sbjct 1486 CTCGTATCCCCAAGATCCAAAAGCTGCTTCAGGACTTCTTCAATGGTAAAGAGCTCAACA 1545 Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427 | | |||||||| |||||||| |||||||||||||| || || || || ||||| || Sbjct 1546 AGAGCATCAACCCCGATGAAGCTGTTGCTTATGGTGCTGCTGTGCAAGCAGCTAT--CCT 1603 Query 196428 CAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTAT 196484 || | | ||||| | | ||||| || ||||| ||||| | ||||| | || | | Sbjct 1604 CATG-GGAGACAAGTCTGAGAACGTGCAGGATCTGCTGCTGTTGGATGTCACCCCTCTGT 1662 Query 196485 CCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTA 196544 | ||||| |||| || || ||||| || |||||| | || | | ||||| || | Sbjct 1663 CTCTGGGCATTGAGACGGCCGGTGGAGTGATGACTGCTCTCATCAAGCGCAACACCACCA 1722 Query 196545 TTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCAT 196603 |||| || ||| || || ||| | || || || || || || | || | || | Sbjct 1723 TTCCCACCAAGCAGACTCAGACCTTCACCACCTACTCAGACAACCAGAGCA-GCGTCCTG 1781 Query 196604 ATTCAAGTATATGAAG--GAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACT 196660 | || || || || | |||| ||| || | ||||| ||| | | || || | Sbjct 1782 GTCCAGGTGTACGAGGGTGAGAGGGCT---ATGACGAAGGACAACAACTTGCTGGGCAAG 1838 Query 196661 TTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTC 196720 || || | || || || || | |||||| | || || || |||||| | || || Sbjct 1839 TTTGACCTAACAGGCATCCCCCCGGCACCCCGTGGAGTCCCCCAGATTGAGGTCACTTTT 1898 Query 196721 GATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCT 196780 || || || || ||||| || || ||||||| |||| ||||||| | || || Sbjct 1899 GACATCGATGCCAATGGTATCCTGAACGTCAGCGCTGTGGACAAGAGCACGGGTAAGGAG 1958 Query 196781 GAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATG 196840 | ||||| || |||||||||||||| || || ||||| || ||||| |||||| Sbjct 1959 AACAAGATCACAATCACCAATGACAAGGGTCGTCTGAGCAAGGATGACATTGACCGTATG 2018 Query 196841 GTTCAAGATGCGGAAAAGTACA 196862 || ||||| ||||| || |||| Sbjct 2019 GTGCAAGAAGCGGAGAAATACA 2040 >seq10859 Length=4031 Score = 170 bits (188), Expect = 3e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || |||||||||||||||||| | Sbjct 232 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 291 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| || || |||||||||||||| ||||||||| Sbjct 292 GACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 351 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| |||||||| || ||||| | || |||||| Sbjct 352 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 411 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || | || ||||| || Sbjct 412 ATCCAGAAGGAATCCACCTTGCATCTTGTGCT 443 Score = 170 bits (188), Expect = 3e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || |||||| | ||||||||| | Sbjct 460 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 519 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| || || |||||||||||||| ||||||||| Sbjct 520 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 579 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| |||||||| || ||| | | || |||||| Sbjct 580 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAAC 639 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || || ||||||||||| || ||||| || Sbjct 640 ATCCAGAAAGAGTCTACTCTGCATCTTGTGCT 671 Score = 168 bits (186), Expect = 9e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || || |||||| | ||||||||| | Sbjct 688 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 747 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | ||||| ||||| || || |||||||||||||| ||||||||| Sbjct 748 GACACCATTGAGAACGTGAAAGCTAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 807 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || ||||| || || ||||| |||||||| || ||||| | || |||||| Sbjct 808 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 867 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||| || || | || ||||| || | || |||||||| Sbjct 868 ATCCAGAAGGAATCCACCTTGCATCTTGTGCTGCGTCTGAGGGGTGGT 915 >seq19879 Length=7372 Score = 165 bits (182), Expect = 1e-35 Identities = 360/539 (67%), Gaps = 0/539 (0%) Strand=Plus/Minus Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 ||||| | |||||||| || || ||||| || || ||||| ||| || | | ||||||| Sbjct 5686 AATGTTCTCATCTTTGACCTTGGAGGTGGCACCTTCGATGTGTCAATTTTGACTATTGAA 5627 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 | ||| || || || || || | ||||| ||||| ||||| | ||||| ||||| || Sbjct 5626 GATGGCATCTTTGAGGTGAAATCCACTGCAGGTGACACTCACTTGGGTGGAGAAGACTTT 5567 Query 195986 GATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATT 196045 || || | || || || | ||| ||| || ||| | ||||| || || Sbjct 5566 GACAACCGCATGGTCAACCACTTCATCGCTGAATTCAAGCGCAAGCACAAGAAGGACATC 5507 Query 196046 TCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACT 196105 | || || || ||||||| || | |||||||| || ||||| || || ||| Sbjct 5506 AGCGAGAACAAGAGAGCAGTTCGTCGCCTCCGCACTGCATGCGAGCGTGCAAAGCGTACT 5447 Query 196106 CTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTC 196165 || ||||||| | || | | |||| |||||||| | | ||| || ||||||||| Sbjct 5446 CTGTCTTCTAGCACGCAGGCCAGTATTGAAATTGATTCTCTCTATGAGGGTATTGACTTC 5387 Query 196166 TATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGT 196225 || || | |||||| | || || ||||||||| | || |||| |||| | Sbjct 5386 TACACGTCCATTACCAGAGCTCGCTTTGAAGAGCTGAATGCTGACCTGTTCCGTGGCACC 5327 Query 196226 ATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAA 196285 |||| ||||| ||| | | || || || || || | || || || || | | || Sbjct 5326 CTGGATCCTGTGGAAAAGGCCCTGCGGGATGCCAAACTTGACAAATCGCAGATCCACGAC 5267 Query 196286 ATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTC 196345 || || || || || || || || ||||| || |||||||| | |||| ||| Sbjct 5266 ATCGTGCTGGTTGGTGGGTCTACTCGTATCCCAAAGATTCAGAAACTGCTGCAGGATTTC 5207 Query 196346 TTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404 |||||| ||||| | ||||| | ||||| || ||||| || || ||||| ||||| Sbjct 5206 TTCAATGGCAAAGAGCTGAACAAGAGTATCAATCCTGATGAGGCTGTGGCTTACGGTGC 5148 Score = 120 bits (132), Expect = 4e-22 Identities = 114/143 (80%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || ||||||||||| || || |||| ||| || || || ||||| ||||| || | Sbjct 5946 ATGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACAAAAGATG 5887 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCA 195826 ||| | ||||| || || || ||| || ||||||||||||| |||||||| ||||| Sbjct 5886 CTGGAACCATTGCAGGGCTCAA-TGTACTGCGAATTATCAATGAGCCAACAGCTGCTGCG 5828 Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849 || ||||||||||||||||| || Sbjct 5827 ATAGCTTATGGTCTGGACAAAAA 5805 Score = 89.7 bits (98), Expect = 7e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 196610 GTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668 ||||||||||||||||| | | || | ||||| ||| | | || || | || || | Sbjct 4246 GTATATGAAGGAGAACG-TGCTATGACGAAGGACAACAACTTGCTGGGCAAATTTGAGCT 4188 Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728 ||| || ||||| |||| ||||||||||| || |||||| | || ||| ||||| || Sbjct 4187 GACTGGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTTGATATTGA 4128 Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGAT 196788 || ||||| || || || || | |||| |||||| ||||||| | ||||| Sbjct 4127 TGCCAATGGCATCCTGAATGTGTCTGCTGTAGACAAGAGCACTGGCAAGGAGAACAAGAT 4068 Query 196789 TGTGATTACCAATGACAAGGG 196809 || || ||||||||||| Sbjct 4067 CACAATAACAAATGACAAGGG 4047 >seq5242 Length=7153 Score = 109 bits (120), Expect = 7e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 |||||||| ||||| || |||||||| || | || || || || |||| || | ||| Sbjct 2834 AAGGATAATCATCTTCTGGGAACTTTTGACCTCACTGGAATCCCTCCTGCCCCTCGTGGT 2893 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 || || |||||| | ||| ||| || ||||| | |||||||| || ||||||||| Sbjct 2894 GTCCCCCAGATTGAAGTTACCTTTGAAATAGATGTGAATGGAATCCTCCGTGTCACAGCT 2953 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816 |||||||||| | |||| || | ||||| |||||| ||||| || ||||| Sbjct 2954 GAGGACAAGGGTACTGGGAACAAAAACAAGATCACGATTACAAATGATCAGAATCGGCTG 3013 Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGT 196859 | || || ||||| | |||||| | ||||| || |||| Sbjct 3014 ACACCAGAAGAGATTGAGAGGATGGTTAATGATGCTGAGAAGT 3056 Score = 100 bits (110), Expect = 4e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 |||||| ||||| ||||||||||| |||||||||| ||| || || ||| | | Sbjct 1224 AACAGCTGCTGCCATTGCTTATGGACTGGACAAGAGAGAGGGTGAG---AAGAATATCCT 1280 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 | || || | |||||||| || ||||||||||| || |||| ||||| ||| | Sbjct 1281 TGTGTTCGACTTGGGTGGTGGAACTTTTGATGTCTCCCTCCTCACAATTGACAATGGAGT 1340 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| ||||||| |||||| ||||| || ||||| ||||| || || Sbjct 1341 CTTTGAAGTTGTGGCTACTAATGGTGACACTCACCTGGGTGGAGAAGACTTTGA 1394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657422668325280