Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq10859 107 1e-18 >seq10859 Length=4031 Score = 107 bits (118), Expect = 1e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| |||||||| | ||| | |||||||| || || ||||| || || | Sbjct 458 CCACCTCTCAGGCGCAGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 399 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || ||||| ||| | |||| || |||||||| || ||| Sbjct 398 AGGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGGGA 339 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || || || | || | |||||| | || || Sbjct 338 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACC 279 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAA 29791 || || || || || ||||| || | ||| || ||||| ||||||||||||| Sbjct 278 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTTAA 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384968147109834