Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq6834 104 2e-17 >seq6834 Length=11115 Score = 104 bits (114), Expect = 2e-17 Identities = 130/174 (75%), Gaps = 6/174 (3%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | ||||||||| ||||| | |||||| |||| | | | ||||| Sbjct 4954 AGCATATGGGGACCAACATGCGATGGCCTAGATCGTATTGTTGAGCGCTTTAATATGCCA 4895 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGC--TTACAGCTTGGTCA 21242 ||| | ||||| || |||||| || | |||||||||||||| || ||||| ||| || Sbjct 4894 GAGTTGCAAGTTGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTATACAG-TTG--CA 4838 Query 21243 GC-TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 || |||| || || || || |||| | |||| || |||||||| || ||| Sbjct 4837 GCAGCTTCTACTTTCAATGGATTCCAGAGGCCAACAATACACTATGTGATGTCA 4784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463235754532320