Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq17223 89.7 1e-12 seq7229 86.0 1e-11 >seq17223 Length=94229 Score = 89.7 bits (98), Expect = 1e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||| |||||||| || |||||||| ||| | || |||||| |||||| Sbjct 10945 GTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATTTTTTGG 11004 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || |||||| | || ||||||||||||| | || |||||| || |||| |||||| Sbjct 11005 CTGAAGAAGAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTCATTAGCAGAGAT 11064 Query 131984 GA 131985 || Sbjct 11065 GA 11066 >seq7229 Length=62315 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 ||||||||||| || ||||| || |||||||| || |||| | || |||||| Sbjct 2325 GTAGCTTTTGCAGCAGTGGAAGGAATCTTCTTTTCTGGCTCTTTTGCATCAATTTTTTGG 2384 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || ||||| | ||||| |||||||||||| |||| || ||| || ||||| |||||| Sbjct 2385 CTGAAGAAAAGAGGATTAATGCCTGGACTCACATTTTCTAATGAACTCATCAGCAGAGAT 2444 Query 131984 GA 131985 || Sbjct 2445 GA 2446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185999672270514