Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq10859 98.7 7e-16 >seq10859 Length=4031 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| || | ||| | ||| ||||| |||||| || |||||||| ||||| Sbjct 686 CCACCTCTCAGGCGCAGCACAAGATGCAGAGTAGACTCTTTCTGGATGTTGTAGTCGGAC 627 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| | || |||| || || || ||||| |||| | ||||||||| | || Sbjct 626 AAGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGGGA 567 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| ||| |||||| || | || || Sbjct 566 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCTCAAC 508 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || ||||| | || || |||||||||||||| Sbjct 507 CTCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 460 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| |||| ||| | ||| | ||| | ||| || || || |||||||| || Sbjct 918 GTTACCACCCCTCAGACGCAGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTC 859 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||| || ||||| | || |||| || || || ||||| |||| | ||||||||| | Sbjct 858 GGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGG 799 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATT 33697 || | ||||| ||||| || || ||||| | | ||| |||||| || | | Sbjct 798 GGGAATGCCTTCCTTGTCCTGGATCTTAGCTTTCA-CGTTCTCAATGGTGTCACTGGGCT 740 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||||| || || ||||| | || || |||||||||||||| Sbjct 739 CAACCTCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 688 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| || | ||| | ||| | ||| || || || |||||||| ||||| Sbjct 458 CCACCTCTCAGGCGCAGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 399 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | ||||||||| | || Sbjct 398 AGGGTGCGCCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGGGA 339 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || |||| | | ||| |||||| || | || || Sbjct 338 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTCTCAATGGTGTCACTGGGCTCAAC 280 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || |||||||||||||| Sbjct 279 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328489778878080