Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq10859 105 2e-17 >seq10859 Length=4031 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||| || || ||||| ||||| || || |||| Sbjct 463 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCTTGGAGGTTGAGCCCAGTGAC 522 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || ||||| ||| || || || Sbjct 523 ACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGCAG 582 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || |||||| |||||||||| | || ||| |||| |||||| || Sbjct 583 AGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAACATC 642 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||||||||| || ||||| Sbjct 643 CAGAAAGAGTCTACTCTGCATCTTGT 668 Score = 87.8 bits (96), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||| || ||||||||||||||||||| || ||||| | ||| || | ||||||||| Sbjct 668 ACAAGATGCAGAGTAGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCC 609 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| || || ||||| |||| || ||| Sbjct 608 AGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGA 576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181011092467554