Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq10859 178 3e-39 >seq10859 Length=4031 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || | ||||| || || |||||||| || || | ||||| | |||||| Sbjct 443 AGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 384 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | || || || || |||| |||||||||||| Sbjct 383 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 324 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| || ||||||||| | ||||||||||| ||||| ||| Sbjct 323 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTC 264 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 || || || || ||||| ||||| | |||||||||| Sbjct 263 TTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTTA 228 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || | ||||| || || |||||||| || || | ||||| | |||||| Sbjct 899 AGCACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 840 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | || || || || |||| |||||||||||| Sbjct 839 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 780 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||||||| || ||||||||| | |||||||| | ||||| ||| Sbjct 779 TGGATCTTAGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTC 720 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 719 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 688 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || ||||| |||||||| |||||||| || || | | ||| | |||||| Sbjct 671 AGCACAAGATGCAGAGTAGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCT 612 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||||||||| ||||| || | || || || || |||| |||||||||||| Sbjct 611 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 552 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||||||| | |||||||| | ||||| ||| Sbjct 551 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTC 492 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 491 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158357823670010