Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cariama_20cristata_20[refseq_20GCF_5F000690535.1_202014-05-12] 53,474 sequences; 1,132,245,425 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq10859 102 6e-17 >seq10859 Length=4031 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23606 TTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACT 23665 ||||||||||||| || || || ||||| || || || || ||||| ||||| ||||| Sbjct 227 TTAAAATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGC 286 Query 23666 CCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAG 23725 ||| ||||| |||| | | || || || ||||| ||||| | || || | Sbjct 287 CCAGTGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCG 346 Query 23726 ATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATT 23785 |||| ||| | | || ||||| ||||| || |||||||| | ||||| | ||| | Sbjct 347 ATCAGCAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACT 406 Query 23786 ACAACATACAAAAAGAGTCCACATTACAT 23814 ||||||| || || || ||||| || ||| Sbjct 407 ACAACATCCAGAAGGAATCCACCTTGCAT 435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337789314284792