Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq25895 95.1 8e-15 >seq25895 Length=23370 Score = 95.1 bits (104), Expect = 8e-15 Identities = 110/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| || ||||| ||||| |||||||| ||||| | || || || ||| Sbjct 1933 TATTCTGCTCCAAAGTGTCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 1874 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || |||||||| ||||||||||| Sbjct 1873 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGATCCATTAGCATCCCAAAT 1818 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | |||||| ||| | ||||||||| Sbjct 1817 CTTCACACCTTTTGCGGACAGCTCTTTG 1790 Score = 82.4 bits (90), Expect = 5e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 5585 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 5526 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || | | |||| || || Sbjct 5525 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCGCCATTTAGAACGTAG 5466 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | |||| || || ||||| ||||| Sbjct 5465 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 5431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346343855353370