Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq25895 105 5e-18 >seq25895 Length=23370 Score = 105 bits (116), Expect = 5e-18 Identities = 137/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| |||| |||||||| || | ||||||||||| || || || ||||| | || Sbjct 1943 CATGTCTTTGTATTCTGCTCCAAAGTGTCTCCACTGGAAACCATAAACTGGTCCCAAATC 1884 Query 25833 TCCATCTTCCCT-GTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 || || || || ||||| ||| ||| |||||||| || || | || ||||| || | Sbjct 1883 CCCCTCCTCTCTGGTGCTGAAA-CCCTGCTTATCCAGGAACTCACGTGATCCATTAGCAT 1825 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| ||||| || || || |||| |||||||||| ||||| || || || || || | Sbjct 1824 CCCAAATCTTCACACCTTTTGCGGACAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 1767 Query 25952 ACAG 25955 |||| Sbjct 1766 ACAG 1763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339705891086793