Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq46366 140 2e-28 >seq46366 Length=3433 Score = 140 bits (154), Expect = 2e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | |||||||||||| || || ||||| || || || ||||| || || | Sbjct 3140 CCACCTCTGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 3199 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || ||||| ||||||||| | |||| || |||||||| || ||| Sbjct 3200 AAGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 3259 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || |||||| | || | |||||| | || ||| Sbjct 3260 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACT 3319 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || || |||||||| | ||| || ||||| ||||||||||| Sbjct 3320 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTTT 3369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384730272688881