Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq103504 96.9 3e-15 >seq103504 Length=7978 Score = 96.9 bits (106), Expect = 3e-15 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || |||||| ||||| | |||||| |||| | | | ||||| Sbjct 3895 AGCATATGGGGACCAACGTGTGATGGCCTAGATCGTATTGTTGAGCGTTTTAATATGCCA 3954 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||| | ||||| || |||||| || | |||||||||||||| || || | || |||| Sbjct 3955 GAGTTGCAAGTTGGTGACTGGATCCTCTTTGAAAACATGGGTGCCTATA-CTGTTGCAGC 4013 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 |||| || || || || |||| | |||| || |||||||| || ||| Sbjct 4014 AGCTTCTACTTTCAATGGATTCCAGAGGCCAACAATACACTATGTGATATCA 4065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462942173720880