Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq13386 98.7 1e-15 >seq13386 Length=23710 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 213995 CAGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTT 214054 ||||| |||||||| ||| | || || || || || ||||| | | | | ||| | Sbjct 2936 CAGATGATTGACGGAGAAATGTATCCACCAACGGTGAAGGACACTCAGGCAGAGATGATC 2995 Query 214055 TACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTC 214114 ||| || ||| || ||| | || | || | | || | ||| |||| || | Sbjct 2996 TACCCTCCTCACGTACCTGAACACTTGCAGTTTTCTGTCGGGCAGGAGGTGTTCGGTTTG 3055 Query 214115 GTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGAC 214174 || || || || ||| ||||||||| || |||||||| || |||||| |||| || ||| Sbjct 3056 GTCCCAGGCTTGATGATGTACGCCACAATATGGCTGAGGGAACACAACCGGGTCTGTGAC 3115 Query 214175 GTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCA 214221 | |||||||| ||||| || || ||| | || || ||||||||||| Sbjct 3116 ATCCTGAAACAGGAGCATCCAGAGTGGGATGATGAGCAGCTGTTCCA 3162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722399182071840