Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cathartes_20aura_20[genbank_20GCA_5F000699945.1_202014-06-11] 104,141 sequences; 1,152,571,117 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq25895 95.1 9e-15 >seq25895 Length=23370 Score = 95.1 bits (104), Expect = 9e-15 Identities = 119/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || ||||||||||||||||| || || || ||||| || || ||||| Sbjct 5588 CCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACT 5529 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTT---TATTTTGTGAC 111894 ||||| ||||||||||| || || ||||| || || || || | || |||| | Sbjct 5528 CCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCGCCATTTAG---A 5472 Query 111895 ACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 || || || || ||||| |||| || |||||||| |||||| Sbjct 5471 ACGTAGAACTGGCAAAGGGCATGGCATGGAGGCAAAGCCATC 5430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391448135417983