Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04] 19,072 sequences; 1,119,188,094 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq19069 114 1e-20 >seq19069 Length=15583329 Score = 114 bits (126), Expect = 1e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||||||||| ||||| ||| || ||||| || || ||| || Sbjct 9796332 AGATATTTCTCTGATGGCTTTGCCACCATGCCATGCCCTTTGCCAGTTCTATGTTCAAAA 9796391 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||||||||| || ||| | ||||| | || | ||||||||||| || || || || Sbjct 9796392 TGGTGAATTGTCTTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCGTT 9796451 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 ||||||||| || ||| | ||||| || || |||||||| ||||| || Sbjct 9796452 CAATATTGCCAGCTATTCACTGCTCACATACATGATTGCCCATGTCAC 9796499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399091213671040