Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04] 19,072 sequences; 1,119,188,094 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq19069 120 2e-22 >seq19069 Length=15583329 Score = 120 bits (132), Expect = 2e-22 Identities = 140/184 (76%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| || | |||||||||||| || || || ||||| | ||| Sbjct 9791976 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAATCCATAAACTGGTCCCAAGTC 9791917 Query 25833 TCCATCTTCCCTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 ||| || || ||| |||| ||| ||| |||||||| || || | || ||||| || | Sbjct 9791916 TCCCTCCTCTCTGGTGCTAAAA-CCCTGCTTATCCAGGAATTCACGTGATCCATTAGCAT 9791858 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 25951 |||| ||||| || ||||| | ||||||||||||| ||||| || || || || || | Sbjct 9791857 CCCAAATCTTCACACCCTTAGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAAC 9791800 Query 25952 ACAG 25955 |||| Sbjct 9791799 ACAG 9791796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340058538416256