Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04] 19,072 sequences; 1,119,188,094 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1840 95.1 1e-14 >seq1840 Length=19535321 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| ||||| || ||||| | ||| |||||||||||||| | || ||||| Sbjct 8681320 GAATCTTTAATGTAGGTGTCGATGAGAAGACTGTACATTTCAGAATGTATGTTTTCCATG 8681379 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||| ||||| || |||||||| | |||||| ||||| || ||||||||| |||| | Sbjct 8681380 GCAATCTGGAAGCCATAGAAACAACGAGCTTCTGTGATTTGTACTTCTTGACTGAATCGC 8681439 Query 93473 TCTAC 93477 || || Sbjct 8681440 TCCAC 8681444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556728044385280