Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04] 19,072 sequences; 1,119,188,094 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq776 102 1e-16 >seq776 Length=165087 Score = 102 bits (112), Expect = 1e-16 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| || || | ||||||| | || || | |||||| || || |||| Sbjct 36220 CCTGCTTCCAGCCATAGAAGTGCATGCTGGTGAGCTTCCCGTAGTTGGGCTCTGCAATGT 36279 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||| ||||||||||| ||||||||||||| | | ||||| ||||| || | | Sbjct 36280 GGATGTTGAGAGACTGGCTCTGGTCGATGAAAGCTCCTCTGTCTGCTGCCATCTTCAGGA 36339 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 |||| ||||| || ||||||||||| ||||| Sbjct 36340 TGGTTTTCTGGGAGATCTCCCACACTGTCTT 36370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794965635000320