Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04] 19,072 sequences; 1,119,188,094 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2070 331 1e-85 seq1561 188 9e-43 seq904 185 1e-41 seq1150 150 2e-31 seq410 89.7 7e-13 seq1833 86.0 8e-12 >seq2070 Length=3411099 Score = 331 bits (366), Expect = 1e-85 Identities = 1041/1596 (65%), Gaps = 35/1596 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| || || || || ||||| || || ||||| | || ||| Sbjct 1204281 GCGATCGGCATCGACTTGGGCACCACGTACTCCTGCGTGGGTGTCTTCCAGCATGGCAAG 1204222 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | || ||||| || ||||| || || || ||||| ||||| || Sbjct 1204221 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACACCGAGCTACGTGGCCTTCACC 1204162 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || || | || ||||| || || || ||| ||||||||||| | ||| Sbjct 1204161 GACACGGAGCGCCTGATCGGGGATGCTGCCAAGAACCAGGTGGCTATGAACCCGACCAAC 1204102 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||| ||||| ||||| || || || ||||||||| || | || || | Sbjct 1204101 ACCATCTTCGACGCCAAGCGCCTCATCGGCCGCAAGTTTGACGACCCCACGGTGCAGTCC 1204042 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTATGATTAA 195597 || || ||| ||||| | | || || || | | ||| ||||| | | | | Sbjct 1204041 GACATGAAGCACTGGCCCTTCCGCGTGGTGAACGAGGGCGGC----AAGCCCAAGGTGCA 1203986 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCG-TCTATGGTGT 195656 || || | | || |||| ||| | || ||||| || | | | || |||||| Sbjct 1203985 GGTGGAGTACAAGGGCGAGATGAAG-ACCTTCTTCCCGGAGGAGATCAGCTCCATGGTGC 1203927 Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 ||| ||||||||||||| ||| || | | |||| | ||| | | || || Sbjct 1203926 TGACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGGCGCAAGGTGCAGAACGCTGTCA 1203867 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 | || || ||||||||||| | || || || || ||||| || || || |||| | | Sbjct 1203866 TCACGGTGCCTGCTTACTTTAACGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCA 1203807 Query 195777 TTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | | || || ||| | | || || || || || || || ||||| || || |||| Sbjct 1203806 TCACCGGCCTGAACGTGATGCGCATCATTAACGAGCCCACGGCAGCTGCCATCGCCTATG 1203747 Query 195837 GTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | |||||||||| | || | ||| || || || | |||||||| | || | Sbjct 1203746 GCTTGGACAAGAAAGGCACCCGGGCTGGAGAGAAGAACGTGCTCATCTTTGACTTGGGAG 1203687 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 | || || || ||||| || | || | || || | || || || || || ||| | | Sbjct 1203686 GGGGCACTTTCGATGTGTCCATCCTTACCATCGAGGACGGCATCTTTGAGGTGAAGTCCA 1203627 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTG 196009 | ||||| || || ||||| ||||| || || || || || | | || |||| Sbjct 1203626 CAGCTGGGGACACCCATCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCACTTTG 1203567 Query 196010 TCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 | || |||||| || ||| | ||| || || | || || |||| | || Sbjct 1203566 TG-GAAGAGTTCAAGCGCAAGCACAAGCGCGACATCGCGGGCAACAAGCGGGCGGTGCGG 1203508 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTC---TCTTCTACGGCTCAAACA 196126 || || | || || || || | ||||| || || ||| || || ||| || | Sbjct 1203507 CGCCTACGCACGGCTTGCGAGAGGGCCAAGCGCACCCTCAGCTCCTCCACG---CAGGCG 1203451 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | ||||||| || || | | || || ||||||||||| || | ||||| ||||| Sbjct 1203450 AGCATTGAGATCGACTCCCTCTACGAGGGCATTGACTTCTACACCTCCATTACTCGTGCC 1203391 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 || ||||| ||| | || | ||| | || | | |||| || || || | | Sbjct 1203390 CGCTTTGAGGAGCTCAATGCCGATCTCTTCCGTGGCACTCTGGAGCCAGTGGAGAAGGCC 1203331 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || ||||| || ||| | |||||| || | | || ||||| || ||||| || || Sbjct 1203330 CTGCGTGATGCCAAGCTAGATAAGGGCCAGATCCAGGAGATTGTGCTGGTGGGGGGCTCT 1203271 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 |||||||| || ||||| ||| || |||| |||||||||| |||||| | ||| Sbjct 1203270 ACCCGTATCCCCAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGTAAAGAGCTCAAC 1203211 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 |||| |||||||| |||||||| |||||||||||||| || || || || ||||| | Sbjct 1203210 AAAAGCATCAACCCCGATGAAGCTGTTGCTTATGGTGCTGCTGTGCAAGCAGCTAT--CC 1203153 Query 196427 TCAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTA 196483 ||| | | ||||| | | || || || ||||| |||| || ||||| | || | Sbjct 1203152 TCATG-GGAGACAAGTCTGAGAATGTGCAGGATCTGTTGCTGCTGGATGTCACCCCTCTG 1203094 Query 196484 TCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACT 196543 |||||||| | |||||||| ||||| || |||||| | || | | ||||| || Sbjct 1203093 TCCCTGGGCATCGAAACAGCTGGTGGAGTGATGACTGCTCTCATCAAGCGCAACACCACC 1203034 Query 196544 ATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCA 196602 ||||| || || | || ||| | || || || || || || | || |||| | Sbjct 1203033 ATTCCCACCAAACAAACCCAGACCTTCACCACCTACTCAGACAACCAGAGCA-GTGTCCT 1202975 Query 196603 TATTCAAGTATATGAAG--GAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAAC 196659 | || || || |||| |||| ||| || ||||||| ||| | |||| || | Sbjct 1202974 GGTCCAGGTGTACGAAGGTGAGAGAGCT---ATGACAAAGGACAACAACTTACTGGGCAA 1202918 Query 196660 TTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTT 196719 || || | ||||| || || | |||||| | || || || ||||| | || || Sbjct 1202917 GTTTGACCTAACGGGCATCCCCCCAGCACCCCGTGGAGTCCCCCAGATCGAGGTAACTTT 1202858 Query 196720 CGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATC 196779 || || || || ||||| || || || |||| |||| ||||||| | || || Sbjct 1202857 TGACATCGATGCCAATGGTATCCTGAATGTCAGTGCTGTGGACAAGAGCACGGGTAAGGA 1202798 Query 196780 TGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTAT 196839 | ||||| || |||||||||||||| || ||| ||||| || ||||| || || Sbjct 1202797 GAACAAGATCACCATCACCAATGACAAGGGTCGCCTTAGCAAGGATGACATTGACCGCAT 1202738 Query 196840 GGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 ||| ||||| || || || |||| | ||| || || Sbjct 1202737 GGTGCAAGAAGCAGAGAAATACAAAGCAGAGGATGA 1202702 >seq1561 Length=6025351 Score = 188 bits (208), Expect = 9e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| |||||||| || ||||| || || |||||||| || |||||| | Sbjct 667250 ATGCAGATCTTCGTGAAAACTCTGACTGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 667191 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| || || |||||||||||||| ||||| ||| Sbjct 667190 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 667131 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || ||||| || ||||| |||||||| || ||||| |||| |||||| Sbjct 667130 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 667071 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||||||||| || ||||| || | || ||||||| Sbjct 667070 ATCCAGAAGGAGTCTACTCTGCATCTTGTGCTTCGTCTGAGGGGTGG 667024 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||| | || || || || |||||||| ||||| ||| | Sbjct 667022 ATGCAGATCTTCGTGAAGACCTTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 666963 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| ||||| |||||||||||||| ||||| ||| Sbjct 666962 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCCGACCAG 666903 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct 666902 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 666843 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||||||||| || ||||| || | || ||||||| Sbjct 666842 ATCCAGAAGGAGTCTACTCTGCATCTTGTGCTTCGTCTGAGGGGTGG 666796 Score = 172 bits (190), Expect = 7e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||| | || || || || |||||||| ||||| ||| | Sbjct 666794 ATGCAGATCTTCGTGAAGACCTTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 666735 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| ||||| |||||||||||||| ||||| ||| Sbjct 666734 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCCGACCAG 666675 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct 666674 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 666615 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||| || || || || ||||| || | || ||||||||| Sbjct 666614 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGCGGGGTGGT 666567 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || |||||| | ||||||||| | Sbjct 667478 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 667419 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || |||| |||||||| || || |||||||||||||| ||||| ||| Sbjct 667418 GACACCATTGAAAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 667359 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct 667358 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 667299 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || || ||| | || || Sbjct 667298 ATCCAGAAGGAATCCACCCTGCACTTGGTGCT 667267 >seq904 Length=4018826 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| ||||||||||| |||||||||||| | Sbjct 3352589 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAAACTATCACTCTCGAGGTTGAGCCCAGT 3352530 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | ||||||||||| || || |||||||||||||| || || ||| Sbjct 3352529 GACACCATCGAGAATGTGAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 3352470 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||| || || || || |||| |||||| Sbjct 3352469 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGACGGGCGCACGCTGTCTGACTACAAC 3352410 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||| || || || || ||||| || | || ||||||| Sbjct 3352409 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGTCTCAGGGGTGG 3352363 Score = 170 bits (188), Expect = 3e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || ||||||||||||||||| | Sbjct 3352361 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAACCCAGT 3352302 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| ||| | || |||||||| ||||| |||||||||||||| || || ||| Sbjct 3352301 GATACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCTGACCAG 3352242 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || ||||| || ||||| ||||| || || || || |||| |||||| Sbjct 3352241 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGGCGCACTCTGTCTGACTACAAC 3352182 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||| || || || || ||||| || | || ||||||| Sbjct 3352181 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGAGGGGTGG 3352135 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || ||||||||||| || |||||| | Sbjct 3352133 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACTATCACCCTTGAAGTTGAGCCCAGT 3352074 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| || || |||||||||||||| ||||| ||| Sbjct 3352073 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 3352014 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || ||||| || ||||| ||||| || || ||| | | || |||||| Sbjct 3352013 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGGCGCACCTTGTCCGACTACAAC 3351954 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || ||||| || || || || ||||| || | || ||||||| Sbjct 3351953 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGAGGGGTGG 3351907 >seq1150 Length=121153 Score = 150 bits (166), Expect = 2e-31 Identities = 355/535 (66%), Gaps = 6/535 (1%) Strand=Plus/Plus Query 195873 TGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTA 195932 ||||||| || || || ||||| || |||||||| || |||| | ||||||| ||| | Sbjct 1425 TGATCTTCGACCTGGGAGGTGGCACCTTTGATGTGTCCATTCTGACGATTGAAGATGGCA 1484 Query 195933 TATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCAC 195992 | || || || || | ||||| ||||| ||||| | ||||| ||||| || || | Sbjct 1485 TTTTTGAGGTGAAATCCACTGCGGGTGACACTCACTTGGGTGGAGAAGACTTTGACAACC 1544 Query 195993 GTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAA 196052 | | || || || | |||||| || ||| | ||||| || || || | Sbjct 1545 GCATGGTCAACCACTTCATCGCGGAGTTCAAGCGCAAGCACAAGAAGGACATCAGTGAGA 1604 Query 196053 ATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTT 196112 | ||||| | || || || | || || || || |||||||| | || || || | Sbjct 1605 ACAAGAGGGCGGTGCGGCGCCTGCGCACGGCCTGCGAGCGTGCCAAGAGGACCCTGTCCT 1664 Query 196113 CTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAA 196172 | | | || | | | ||||||||||| | | ||| || ||||||||||| || Sbjct 1665 CCTCCACCCAGGCCAGCATCGAGATTGATTCTCTCTATGAGGGGATTGACTTCTACACCT 1724 Query 196173 CTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTA---TGG 196229 | || ||| | || || ||||| ||| | ||| | || |||| | | ||| ||| Sbjct 1725 CCATCACCAGAGCTCGCTTTGAGGAGCTGAACGCCGACCTGTTCCG---GGGTACCCTGG 1781 Query 196230 AACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTG 196289 | ||||| || | | || | || || ||| |||| ||||| || | |||| |||| Sbjct 1782 ATCCTGTGGAGAAGGCTCTGAGGGATGCCAAGCTGGACAAGTCGCAGATCCATGATATTG 1841 Query 196290 TCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCA 196349 | | || || || || || || || || |||||||| || |||| || |||| Sbjct 1842 TGTTGGTTGGTGGGTCTACTCGGATCCCCAAGATTCAGAAGTTGCTGCAGGATTTTTTCA 1901 Query 196350 ATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404 || ||||| | ||||| | |||||||| |||||||| || ||||| ||||| Sbjct 1902 ATGGCAAAGAGCTGAACAAGAGCATCAACCCTGATGAAGCTGTGGCTTACGGTGC 1956 Score = 116 bits (128), Expect = 5e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || ||||| || || || || |||| ||| || || || ||||| ||||| || | Sbjct 1171 ATGCTGTGGTGACCGTGCCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACAAAAGATG 1230 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAA 195827 ||| | ||||| || || ||| || |||||||||||||| |||||||| ||||||| Sbjct 1231 CTGGAACCATTGCAGGGCTCAACGTGCTGAGAATTATCAATGAGCCAACAGCTGCTGCAA 1290 Query 195828 TTGCTTATGGTCTGGACAAGAA 195849 | |||||||| |||||||| || Sbjct 1291 TAGCTTATGGGCTGGACAAAAA 1312 Score = 95.1 bits (104), Expect = 2e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGA 196665 || || |||||||||||||| | | || | ||||| ||| | | || || | ||||| Sbjct 2725 CAGGTCTATGAAGGAGAACG-TGCTATGACTAAGGACAACAACTTGCTGGGCAAGTTCGA 2783 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 |||| || ||||| |||| ||||||||||| || |||||| | || ||| ||||| Sbjct 2784 GCTGACTGGTATTCCCCCTGCTCCCAGAGGTGTCCCTCAGATTGAAGTCACCTTTGATAT 2843 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 || || ||||| || || ||||| | |||| ||||||| ||||||| | || Sbjct 2844 TGATGCCAATGGCATCCTCAACGTGTCTGCTGTGGACAAGAGCACTGGCAAGGAGAACAA 2903 Query 196786 GATTGTGATTACCAATGACAAGGG 196809 ||| || || || |||||||| Sbjct 2904 GATCACAATCACAAACGACAAGGG 2927 Score = 95.1 bits (104), Expect = 2e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGA 196665 || || |||||||||||||| | | || | ||||| ||| | | || || | ||||| Sbjct 3750 CAGGTCTATGAAGGAGAACG-TGCTATGACTAAGGACAACAACTTGCTGGGCAAGTTCGA 3808 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 |||| || ||||| |||| ||||||||||| || |||||| | || ||| ||||| Sbjct 3809 GCTGACTGGTATTCCCCCTGCTCCCAGAGGTGTCCCTCAGATTGAAGTCACCTTTGATAT 3868 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 || || ||||| || || ||||| | |||| ||||||| ||||||| | || Sbjct 3869 TGATGCCAATGGCATCCTCAACGTGTCTGCTGTGGACAAGAGCACTGGCAAGGAGAACAA 3928 Query 196786 GATTGTGATTACCAATGACAAGGG 196809 ||| || || || |||||||| Sbjct 3929 GATCACAATCACAAACGACAAGGG 3952 >seq410 Length=4101353 Score = 89.7 bits (98), Expect = 7e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||||||||| || |||||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 469904 AGGCATTCCTCCTGATCAGCAGCGACTGATTTTTGCGGGGAAGCAGCTAGAAGATGGACG 469845 Query 172023 TACCCTCGCTGATTACAACGTTCAAAA 172049 || || |||| ||||| ||||||| Sbjct 469844 CACACTGTCTGACTACAATATTCAAAA 469818 >seq1833 Length=6533496 Score = 86.0 bits (94), Expect = 8e-12 Identities = 123/173 (71%), Gaps = 3/173 (2%) Strand=Plus/Plus Query 195815 ACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTG 195874 ||||| ||||| ||||||||||| |||||||| | || | ||| || || | | Sbjct 980766 ACAGCTGCTGCCATTGCTTATGGATTGGACAAG---AGAGAGGGAGAGAAGAACATCCTT 980822 Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934 | ||||| | |||||||| || || |||||||| || |||| ||||| ||| | Sbjct 980823 GTGTTTGACTTGGGTGGTGGAACTTTCGATGTCTCCCTGCTCACAATTGACAATGGAGTC 980882 Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| |||||| |||||| ||||| | ||||| ||||| || || Sbjct 980883 TTTGAAGTTGTGGCTACGAATGGTGACACTCACTTGGGTGGAGAAGACTTTGA 980935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657705565603840