Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04] 19,072 sequences; 1,119,188,094 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq19067 87.8 4e-12 >seq19067 Length=13999166 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 ||| | || || |||||| ||||||||| || |||||||| ||| | || |||||| Sbjct 10805219 AGAGTGGTTGCCTTTGCTGCTGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATA 10805160 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCG 131977 |||||| | |||||| | || ||||||||||||| | || |||||| || | || Sbjct 10805159 TTTTGGTTGAAGAAGAGGGGCCTGATGCCTGGACTGACCTTTTCCAATGAACTTATTAGC 10805100 Query 131978 AGAGATGA 131985 |||||||| Sbjct 10805099 AGAGATGA 10805092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186522790424192