Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04]
19,072 sequences; 1,119,188,094 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1561 82.4 7e-11
seq776 82.4 7e-11
>seq1561
Length=6025351
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || ||||||||||| || ||| ||| |||||| ||||| || || |
Sbjct 667057 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCG 667116
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| || || || || |||||||| || || || || || |
Sbjct 667117 AAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACG 667176
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||||| ||||| | || | || || ||||||||||||||
Sbjct 667177 TTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGAGTTTTC 667236
Query 132110 ATGAAAATCTGCATGACT 132127
| ||| ||||||||| ||
Sbjct 667237 ACGAAGATCTGCATGCCT 667254
>seq776
Length=165087
Score = 82.4 bits (90), Expect = 7e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562
|||||| || ||| || | |||||||||||||| || ||| |||| || ||||| |
Sbjct 44091 TGTACTCCATGATCTCTGTGCACAGGTTGCTGCTCTTGATGGTCCCCAGGTTCTGCTGGT 44150
Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 147615
|||| || || ||||| | ||| ||| |||||||||| || ||| ||||||
Sbjct 44151 TGCTCTTGCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCCCGTCTCG 44203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476497575889920
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |