Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04] 19,072 sequences; 1,119,188,094 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq1569 104 3e-17 >seq1569 Length=1129839 Score = 104 bits (114), Expect = 3e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 214092 TGGGTAACGAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGA 214151 |||| | ||| ||||||| | || || || | ||| ||||||| | |||||||||| Sbjct 528710 TGGGGCAGGAGGTGTTTGGTTTGGTCCCAGGCCTGATGATGTACGCTACGATCTGGCTGA 528769 Query 214152 GAGAGCACAACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAAC 214211 | || |||||| |||| || ||||| |||||||| |||||||| || ||| | || || | Sbjct 528770 GGGAACACAACCGGGTCTGTGACGTCCTGAAACAGGAGCACCCAGAGTGGGATGATGAGC 528829 Query 214212 AGCTGTTCCA 214221 |||||||||| Sbjct 528830 AGCTGTTCCA 528839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723168355553280