Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chaetura_20pelagica_20[refseq_20GCF_5F000747805.1_202014-09-04]
19,072 sequences; 1,119,188,094 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq2130 109 5e-19
seq19069 84.2 2e-11
>seq2130
Length=11326115
Score = 109 bits (120), Expect = 5e-19
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 3245 GTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAG 3304
|| || || ||||| |||||||||||||| |||||||| | || || || ||||| |||
Sbjct 3290955 GTGGTGGAGGAGCTGTTCCGAGATGGGGTGAACTGGGGCAGGATCGTGGCCTTCTTCGAG 3290896
Query 3305 TTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAAC 3364
|| || || || ||||| ||||| |||||||| | | || |||| ||||| |||| |
Sbjct 3290895 TTCGGCGGCGTGATGTGCGTGGAGAGCGTCAACCGGGAGATGTCCTCACTCGTGGACAGC 3290836
Query 3365 ATTGCCGCGTGGATGACAGA 3384
|| || || |||||||| ||
Sbjct 3290835 ATCGCTGCCTGGATGACCGA 3290816
>seq19069
Length=15583329
Score = 84.2 bits (92), Expect = 2e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
||||| || | || |||||||||||||| | || |||||||| | ||| || ||
Sbjct 9796505 AGCCCCGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAACGGC 9796446
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
|| || || ||||| ||| | || ||||| || | ||||||||| | || || ||| |
Sbjct 9796445 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTTGA 9796386
Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694
||||| ||||| | | | || ||||| |||| | ||||
Sbjct 9796385 ACATAGAACTGGCAAAGGGCATGGCATGGTGGCAAAGCCAT 9796345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414380459012608
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |