Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02] 59,693 sequences; 1,086,566,339 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2877 105 1e-17 >seq2877 Length=20153 Score = 105 bits (116), Expect = 1e-17 Identities = 116/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | ||||||| | || |||| |||||| || || |||| Sbjct 15207 CCTGCTTCCAGCCGTAGAAGTGCATGCTGGTGAGCTTGCCGTAGTTGGGCTCTGCGATGT 15148 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATA 204028 | ||||| ||||||||||| ||||||||||| | |||| | ||||| ||||| |||| Sbjct 15147 GGATGTTGAGAGACTGGCTCTGGTCGATGAACG-CGCCTCTGTCTGCTGCCATCTTGAGG 15089 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | || ||||| || ||||||||||| ||||| Sbjct 15088 ACAGTTTTCTGGGAGATCTCCCACACTGTCTT 15057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794561885008080