Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02] 59,693 sequences; 1,086,566,339 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq42126 100 4e-16 >seq42126 Length=126178 Score = 100 bits (110), Expect = 4e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 |||||||||| || | ||| || |||||||||||||| | ||||| | |||||||| | Sbjct 118074 CACCATAAGGCGATCTTGGGTAAAAAGGTGTGGTCTCCTTTTGTGGGATTTCTTGCACTT 118015 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 | ||| |||||||||||||||| |||||||||| Sbjct 118014 TTCCAAAAAGTTCACTGGTGGAGGCTTGATAGA 117982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664997833034760