Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02] 59,693 sequences; 1,086,566,339 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq24783 87.8 4e-12 >seq24783 Length=9331 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 49866 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 49925 |||||| |||||| | ||| ||||||||||||||||| || |||||||| || |||||| Sbjct 3455 TCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTCTTCTTCAGCCAAAAAATCGATGCA 3396 Query 49926 AAACTACTAGAAAAGAATATACCCTCGACACACGCAAATGCTA 49968 ||| | ||||||||| || || || || ||||| |||| Sbjct 3395 AAAGAGCCAGAAAAGAAAATTCCTTCCACTGCTGCAAAAGCTA 3353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983727053390550