Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02] 59,693 sequences; 1,086,566,339 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq11043 98.7 1e-15 >seq11043 Length=29147 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 214100 GAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCAC 214159 ||| ||||||| | || || || || ||| ||||||| | || |||||||| || ||| Sbjct 3248 GAGGTGTTTGGTTTGGTCCCAGGCTTAATGATGTACGCTACGATATGGCTGAGGGAACAC 3307 Query 214160 AACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTC 214219 ||| |||| || ||| | |||||||| ||||| ||||| ||| | || || ||||||||| Sbjct 3308 AACCGGGTCTGTGACATCCTGAAACAGGAGCATCCGGAGTGGGATGATGAGCAGCTGTTC 3367 Query 214220 CA 214221 || Sbjct 3368 CA 3369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722801070220320