Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02]
59,693 sequences; 1,086,566,339 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq2877 87.8 2e-12
seq13104 82.4 1e-10
>seq2877
Length=20153
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| || |||||||| | ||||||||||| | ||| | || || |||||
Sbjct 9522 CTCATCTTTGCTGGTGTACTCCACGATTTCTGTACACAGATTGCTGCATTTGATGGTCCC 9463
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
||| |||| || || |||||| |||||| | || ||||| |||||||| || || ||
Sbjct 9462 CAAGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCC 9403
Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
||||||||||| || | | ||||| | |||
Sbjct 9402 GGTCTCCGTCTGAGACTCAATGATAGCGTACCA 9370
>seq13104
Length=28606
Score = 82.4 bits (90), Expect = 1e-10
Identities = 94/124 (76%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737
||||||||| | |||||||||||| ||||| || || ||||| || |||| |||||
Sbjct 18666 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 18725
Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
||| |||| | ||||| ||| || || || || |||||||| || || || |||||
Sbjct 18726 TCAGCCAAAATATAGCAGCA-AAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAG 18784
Query 122797 GCAA 122800
||||
Sbjct 18785 GCAA 18788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627563386072800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |