Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02] 59,693 sequences; 1,086,566,339 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2877 105 8e-18 >seq2877 Length=20153 Score = 105 bits (116), Expect = 8e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | ||||| | ||||||| || ||||| || ||||| |||||||| ||||||||| Sbjct 9370 TGGTACGCTATCATTGAGTCTCAGACGGAGACCGGCACACCGTACATGCTGTACAAAGAC 9429 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 | || |||| ||||| ||||| |||| ||||| ||||| | |||||| ||| Sbjct 9430 TCTTGCAACCGGAAGAGCAATCAGCAGAACTTGGGGACCATCAAATGCAGCAATCTGTGT 9489 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 ||||||||| |||| | || |||||||||| Sbjct 9490 ACAGAAATCGTGGAGTACACCAGCAAAGATGAG 9522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582825592663320