Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02] 59,693 sequences; 1,086,566,339 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq29023 120 4e-22 >seq29023 Length=61511 Score = 120 bits (132), Expect = 4e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729 || || |||| |||| | | |||||||| || || ||| | ||||| | || ||||| Sbjct 34228 GCTTTATGGTGGTATTATGTTTCTAAAGGAATTGAGTATTTGGATACAGTATTTTTCATC 34169 Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789 |||| ||||||||||||||| |||| || | || || || |||||||| |||||||| Sbjct 34168 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 34109 Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || || | ||||| || ||||| ||| ||||||| ||||| Sbjct 34108 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 34068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602730729106320