Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydotis_20macqueenii_20[refseq_20GCF_5F000695195.1_202014-06-02] 59,693 sequences; 1,086,566,339 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq39000 96.9 3e-15 >seq39000 Length=16925 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || ||||||||||| || ||||| ||||||| |||||||| || ||| ||| Sbjct 1886 AAGTGTCTCCACTGGAAACCATACACTGGTCCCAAATCTCCCTCCTCTCTGGTAATGAAA 1827 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||| |||| || || | || || || || ||||| ||||| || ||||| | Sbjct 1826 CCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTCACACCCTTTGCA 1767 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 ||||||||||||| ||||| ||||| Sbjct 1766 GAGAGCTCTTTGGCATTTGTAGACCC 1741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405867712844998