Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_000902.1 Length=60942 Score E Sequences producing significant alignments: (Bits) Value seq354460 720 0.0 seq237293 132 2e-26 seq243231 91.5 6e-14 >seq354460 Length=442 Score = 720 bits (798), Expect = 0.0 Identities = 425/442 (96%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 6036 CCTGGGCCATGTAAGCCGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 6095 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 6096 CCCGGGAGGTAAACGGGCATTTCAGCTCAAGGCCATTGCCGTCACTGCATAAACCATCGG 6155 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 6156 GAGAGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAATAACATTCA 6215 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 6216 CGCCGGAAGTGAACTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 6275 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 6276 GTGCTTTAGCGGGGATTTCCGGAGCCACACCGGTGCAAACCTCGGCAAGCAGGGTGTGGA 6335 ||||||||||| | |||||||||||| |||||||||||||| |||||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 6336 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCTGAGCGGGGCTTTGCTATCACGTTGT 6395 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 6396 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCATGCATCATCCCCCTGTT 6455 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 6456 CGACAGCTCTCACGTCGATTCC 6477 ||||||||||||| ||||| || Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq237293 Length=409 Score = 132 bits (146), Expect = 2e-26 Identities = 75/76 (99%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 15087 ATGACCATCTACATCACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 15146 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 353 ATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 294 Query 15147 TGGGGGAGAGGGAAGT 15162 |||||||||||||||| Sbjct 293 TGGGGGAGAGGGAAGT 278 >seq243231 Length=365 Score = 91.5 bits (100), Expect = 6e-14 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 19641 ACGGTCAGAAAATACACTGGCGATAAAGAAGGGAAAAGACACGCTATCGTCAACGGTGTT 19700 ||||||||||||||| || |||||||| ||||||| ||||| |||||||||| ||| Sbjct 6 ACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTT 65 Query 19701 CTTATGGTTCACCGCGGATGG-GGTAAAGA 19729 || || ||||| ||||||||| || ||||| Sbjct 66 CTCATCGTTCATCGCGGATGGAGGGAAAGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193723082526512