Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_000924.1 Length=61670 Score E Sequences producing significant alignments: (Bits) Value seq354460 717 0.0 seq237293 224 4e-54 seq243231 91.5 6e-14 >seq354460 Length=442 Score = 717 bits (794), Expect = 0.0 Identities = 424/442 (96%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 6037 CCTGGGCCATGTAAGCCGATTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 6096 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 6097 CCCGGGAGGTAAACGGGCATTTCAGCTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 6156 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 6157 GAGAGCAGGCGGTGCGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 6216 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 6217 CGCCGGAAGTGAACTCAAAGAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 6276 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 6277 GAGCCTTAGCGTTAACTTCCGGAGCCACACCGGTGCAAACCTCAGCCAGCAGGGTGTGGA 6336 | || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 6337 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCTGATCGGGGTTTTGCTATTACGTTGT 6396 |||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 6397 GAATTTCTGAAGCTGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCTCCCTGTT 6456 ||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 6457 CGACAGCTCTCACGTCGATCCC 6478 ||||||||||||| |||||||| Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq237293 Length=409 Score = 224 bits (248), Expect = 4e-54 Identities = 129/132 (98%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 15420 GAGTGTCGCCAGAGTGCAGCGATGAAACGGGTATTGGCGGTATATGGAGTTAAAAGATGA 15479 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct 409 GAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGGAGGTATATGGAGTTAAAAGATGA 350 Query 15480 CCATCTACATCACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATTTGGG 15539 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 349 CCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATTTGGG 290 Query 15540 GGAGAGGGAAGT 15551 |||||||||||| Sbjct 289 GGAGAGGGAAGT 278 >seq243231 Length=365 Score = 91.5 bits (100), Expect = 6e-14 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 20150 ACGGTCAGAAAATACACTGGCGATAAAGAAGGGAAAAGACACGCTATCGTCAACGGTGTT 20209 ||||||||||||||| || |||||||| ||||||| ||||| |||||||||| ||| Sbjct 6 ACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTT 65 Query 20210 CTTATGGTTCACCGCGGATGG-GGTAAAGA 20238 || || ||||| ||||||||| || ||||| Sbjct 66 CTCATCGTTCATCGCGGATGGAGGGAAAGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196038700615296