Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq339661 558 3e-154 seq301662 549 2e-151 seq312753 235 5e-57 >seq339661 Length=371 Score = 558 bits (618), Expect = 3e-154 Identities = 340/371 (92%), Gaps = 0/371 (0%) Strand=Plus/Plus Query 3750 TGTTTTTTATTAACGATACAAACCAAACGCAACAAGAACATTTGTAGTATTATCTATAAT 3809 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TGTTTTTTATTAACGATACAAACCAAACGCAACAAGAACATTTGTAGTATTATCTATAAT 60 Query 3810 TGAAAACGCGTAGTTATAATCGCTGAGGTAATATTTAAAATCATTTTCAAATGATTCACA 3869 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TGAAAACGCGTAGTTATAATCGCTGAGGTAATATTTAAAATCATTTTCAAATGATTCACA 120 Query 3870 GTTAATTTGCGACAATATAATTTTATTTTCACATAAACTAGACGCCTTGTCGTCTNNNNN 3929 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTAATTTGCGACAATATAATTTTATTTTCACATAAACTAGACGCCTTGTCGTCTTCTTC 180 Query 3930 NNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCTCATAAAAATTAACATAGTTATTATCGTA 3989 |||||||||||||||||||||||||||||||||| Sbjct 181 TTCGTATTCCTTCTCTTTTTCATTTTTCTCCTCATAAAAATTAACATAGTTATTATCGTA 240 Query 3990 TCCATATATGTATCTATCGTATAGAGTAAATTTTTTGTTGTCATAAATATATATGTCTTT 4049 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TCCATATATGTATCTATCGTATAGAGTAAATTTTTTGTTGTCATAAATATATATGTCTTT 300 Query 4050 TTTAATGGGGTGTATAGTACCGCTGCGCATAGTTTTTCTGTAATTTACAACAGTGCTATT 4109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTTAATGGGGTGTATAGTACCGCTGCGCATAGTTTTTCTGTAATTTACAACAGTGCTATT 360 Query 4110 TTCTGGTAGTT 4120 ||||||||||| Sbjct 361 TTCTGGTAGTT 371 >seq301662 Length=662 Score = 549 bits (608), Expect = 2e-151 Identities = 311/314 (99%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 4241 TTAGCAGCACCGGATTAACATAACTTTCCAAAATGTTGTACGAACCGTTAAACAAAAACA 4300 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 TTCGCAGCACCGGATTAACATAACTTTCCAAAATGTTGTACGAACCGTTAAACAAAAACA 62 Query 4301 GTTCACCTCCCTTTTCTATACTATTGTCTGCGAGCAGTTGTTTGTTGTTAAAAATAACAG 4360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 63 GTTCACCTCCCTTTTCTATACTATTGTCTGCGAGCAGTTGTTTGTTGTTAAAAATAACAG 122 Query 4361 CCATTGTAATGAGACGCACAAACTAATATCACAAACTGGAAATGTCTATCAATATATAGT 4420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 CCATTGTAATGAGACGCACAAACTAATATCACAAACTGGAAATGTCTATCAATATATAGT 182 Query 4421 TGCTGATATCATGGAGATAATTAAAATGATAACCATCTCGCAAATAAATAAGTATTTTAC 4480 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 TGCTGAT-TCATGGAGATAATTAAAATGATAACCATCTCGCAAATAAATAAGTATTTTAC 241 Query 4481 TGTTTTCGTAACAGTTTTGTAATaaaaaaaCCTATAAATATGCCGGATTATTCATACCGT 4540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 242 TGTTTTCGTAACAGTTTTGTAATAAAAAAACCTATAAATATTCCGGATTATTCATACCGT 301 Query 4541 CCCACCATCGGGCG 4554 |||||||||||||| Sbjct 302 CCCACCATCGGGCG 315 >seq312753 Length=398 Score = 235 bits (260), Expect = 5e-57 Identities = 150/167 (90%), Gaps = 17/167 (10%) Strand=Plus/Minus Query 1821 AGGGCCCCCATTTTGGATGGTCTGCTCAAATAACGATTTGTATTTATTGTCTACATGAAC 1880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 155 AGGGCCCCCATTTTGGATGGTCTGCTCAAATAACGATTTGTATTTATTGTCTACATGAAC 96 Query 1881 ACGTATAGCTTTATCACAAACTGTATATTTTAAACTGTTAGCGACGTCCTTGGCCACGAA 1940 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 ACGTATAGCTTTATCACAAACTGTATATTTTAAACTGTTAGCGACGTC------------ 48 Query 1941 CCGGACCTGTTGGTCGCGCTCTAGCACGTACCGCAGGTTGAACGTAT 1987 |||||||||||||||||||||||||||||||||||||||||| Sbjct 47 -----CCTGTTGGTCGCGCTCTAGCACGTACCGCAGGTTGAACGTAT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425697538450445