Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq14041 154 2e-32 seq8271 114 2e-20 >seq14041 Length=21113 Score = 154 bits (170), Expect = 2e-32 Identities = 199/275 (72%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | |||||||||||||||||||| | |||||||||||| Sbjct 952 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 893 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 || || |||||| ||| ||| |||| | ||| |||| | ||||||| || Sbjct 892 GACCGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGCGG 833 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTC 83298 ||||| |||||| ||||||| |||||| || || || | ||||| ||||| Sbjct 832 GAAGGGCAGCGCCTCTTTCAGGAAGGTGAAGAGGGGGTGCGCGTTCTTCCCGTTCACCTC 773 Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358 |||||||||||| | || || | ||||| | | || || |||||||| ||||||| ||| Sbjct 772 GCACTTCTCGAACATGATGAAATCCGGCTTGTACCCCTTGCCAGGACGAACGTGCTCCAG 713 Query 83359 GGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 || ||| |||||| | ||| ||| ||||||| Sbjct 712 CGAGAGCAGGATCTCCTCGTTCGTGGCATTTTCCT 678 >seq8271 Length=4193 Score = 114 bits (126), Expect = 2e-20 Identities = 217/310 (70%), Gaps = 12/310 (4%) Strand=Plus/Minus Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCG 83115 ||| ||| || |||||||||||||| | ||| | |||| ||||||| | || Sbjct 1971 GAGGAGGCGCTGGATGTCGGGCTCCAGCTGGACGGTGGGCGTGCGGGGGCTGTAGCGCCG 1912 Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175 | || || || | |||||||| ||| |||||||| ||||||| | |||| || Sbjct 1911 GAAAGGTTCCCCCTCGGGACCCACCAGGAATTTCTCGAAATTCCAGGAGATGTCGGAACG 1852 Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGC-GTGCTCATGTCGTCGC 83234 | ||| || ||||| | || |||| ||| || || |||| | || ||| Sbjct 1851 CCGCACCGGGCTCCAGGTGAGGAAGCGGGGCTCGGCCATCAGGTGTGC-CGCCTCATCGG 1793 Query 83235 TAGGCGCCGGCAGG---GCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTGCACC 83289 ||||| |||||| |||| || ||| ||||||||| || || || ||| || || Sbjct 1792 CCGGCGCGGGCAGGTGAGCCT-TC--AGGTAGGCGAAGACGGGGTGGGTGTCCT-GC-CC 1738 Query 83290 GTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGAC 83349 ||| |||| |||||||| |||||| | ||||| |||||||||||| ||| || || || Sbjct 1737 GTTCACCTGGCACTTCTGGAAGAGGGTGAAGTTGGGCTCGAAGCCGCCCCCCGGCCGCAC 1678 Query 83350 GTGCTTCAGG 83359 |||||||||| Sbjct 1677 GTGCTTCAGG 1668 Score = 113 bits (124), Expect = 5e-20 Identities = 120/156 (77%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447 || |||||| || || ||||| || ||||| || ||||| ||||||| ||| | || Sbjct 1545 TTACCTGGTAGCCAAATTGGTTGCAGGGGAAGCCCAGCACGACCAGCCGCCGGGGG--TA 1488 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 | | | ||||||| ||| | ||| ||||| ||||| |||||| | ||||||||||||| Sbjct 1487 GCGGGCT-TGCAGCTGGTTGAGCTGGGTGTAGTCCCGCACCGTGGTGCCTCAGAGGGACG 1429 Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGA 83543 | ||||| |||||||| | || |||||||| |||| Sbjct 1428 CCACGTTTTCGATGAGGACCACGCGGCCCCGGAAGA 1393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604950581626760