Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq408179 286 1e-72 seq389875 131 5e-26 >seq408179 Length=355 Score = 286 bits (316), Expect = 1e-72 Identities = 275/353 (78%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 3310 GGCTATCCCGGCTGGATGGCGCAAAACTGGACCTACATCCCTCGCGAACTACCCGGCGGT 3369 || ||||| ||||||||| |||| || ||||| | || || || || |||||||||| Sbjct 2 GGGTATCCTGGCTGGATGCCGCAGAAATGGACATGGATACCCCGTGAGTTACCCGGCGGG 61 Query 3370 CGACCTTCGTTTATCCATGTATTCGAACCGATGGAGGATGGACAGACCCGTGGGGCCAAT 3429 || | ||| | || || || || ||||| |||||| || |||| || || || ||| Sbjct 62 CGCGCCTCGGTCATTCACGTTTTTGAACCCGGGGAGGACGGGCAGAATCGCGGTGCAAAT 121 Query 3430 GCGTTTTACAGCGTGATGGAGCAGATGAAAATGCTCGACACCCTGCAAAATACCCAGCTC 3489 | ||||||||||||||||||||||||||| ||||||||||| ||||| || || ||||| Sbjct 122 GTGTTTTACAGCGTGATGGAGCAGATGAAGATGCTCGACACGCTGCAGAACACGCAGCTG 181 Query 3490 CAGAGCGCGATAGTGAAGGCTATGTATGCGGCTACCATCGAGAGTGAGCTGGATACCCAA 3549 |||||||| || |||||||| |||||||| || ||||| ||||||||||||||||| || Sbjct 182 CAGAGCGCCATTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAG 241 Query 3550 TCGGCGATGGACTTTATTCTCGGTGCAGATAATAAAGAGCAGCAGAGCAAACTGACGGGC 3609 || |||||||| |||||||| || || | | | | ||||||| | | ||||| ||| Sbjct 242 TCAGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGGC 301 Query 3610 TGGCTCGGCGAAATGGCAGCCTATTACTCTGCTGCGCCGGTTCGCCTTGGCGG 3662 ||| | || ||||| || || |||||| | || |||||||| || || || || Sbjct 302 TGGATTGGTGAAATTGCCGCGTATTACGCCGCAGCGCCGGTCCGGCTGGGAGG 354 >seq389875 Length=300 Score = 131 bits (144), Expect = 5e-26 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 2504 GAACTGGATGCCGCGCGCGCTGCGTTACATGACCTGATGATGGGGAAACGTGTGGCGACA 2563 ||||| | || || || || || | ||||||||||||| || ||||| ||||| ||| Sbjct 220 GAACTTGCCGCTGCCCGTGCGGCACTGCATGACCTGATGACAGGTAAACGGGTGGCAACA 161 Query 2564 GTACAAAAAGACGGTCGAAGAGTGGAATTTACAGCTACCTCAGTCAGCGATCTGAAAAAG 2623 ||||| |||||||| ||||| ||||| ||||| || || || || || |||||||| Sbjct 160 GTACAGAAAGACGGACGAAGGGTGGAGTTTACGGCCACTTCCGTGTCTGACCTGAAAAAA 101 Query 2624 TATATCGCCGACCTTGAATCACAGGTCGGAACCACATCACGACGCCGGGGGCCTGCTGGG 2683 ||||| || || || ||| ||| ||| | ||| |||||| |||| ||||| || Sbjct 100 TATATTGCAGAGCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACCTGCAGGA 41 Query 2684 TTTTACGTATGAAAA 2698 ||||| ||||||||| Sbjct 40 TTTTATGTATGAAAA 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147388455192286