Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq109713 107 2e-18 seq141886 96.9 4e-15 seq150205 87.8 2e-12 seq50110 87.8 2e-12 >seq109713 Length=16520 Score = 107 bits (118), Expect = 2e-18 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 || |||| || ||| || ||||||||||| | ||| || |||||||| || |||| ||| Sbjct 259 GAACCGCCGCCGCGGGACAACCCCCGCCGCTGCGTCATCTTCCCCATCCAGTACCACGAC 318 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTG 116689 || |||| |||||||| ||||||||||| || |||||||| | ||||||||| Sbjct 319 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGTG 372 >seq141886 Length=39376 Score = 96.9 bits (106), Expect = 4e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 40825 GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCC 40884 || ||||| |||||||| || | |||||||| ||||||||||||||||||||| || Sbjct 39376 GCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTACAACATCCAGAAGGAGTCC 39317 Query 40885 ACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || |||||||| ||| ||||| ||||||| ||| Sbjct 39316 ACCCTGCATCTTGTGCTGCGCCTGAGGGGTGGC 39284 >seq150205 Length=278 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || |||||| | |||||||| || || |||| ||||||||| |||||||| || | ||| Sbjct 128 GGGATCCCCCCTGACCAGCAGCGGCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGC 187 Query 40852 ACCCTCAACGACTACAACATCCAGAA 40877 |||||| ||||||||||||||||| Sbjct 188 ACCCTCGCAGACTACAACATCCAGAA 213 >seq50110 Length=15533 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| || || || || || || ||| ||||||||||||| || || || ||||||| Sbjct 4088 TGGTTGCTTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTT 4029 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| | ||||| ||||| || ||||||||| ||| ||||| || ||| | Sbjct 4028 GGCTGAAGAAGAGAGGCCTGATGCCTGGGCTGACTTTCTCCAATGAGCTTATTAGCAGAG 3969 Query 117162 ACGAGG 117167 | |||| Sbjct 3968 ATGAGG 3963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511964180339440