Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq121029 89.7 4e-13 >seq121029 Length=35959 Score = 89.7 bits (98), Expect = 4e-13 Identities = 109/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| || || |||||||| ||||| | || || || ||| Sbjct 20978 TATTCTGCTCCAAAGTGCCTCCACTGAAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 20919 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || || ||||| ||||||||||| Sbjct 20918 CTGGTCCTGAAACCCTGCTTATC----CAGGAACTCACGTGACCCATTAGCATCCCAAAT 20863 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | |||||| ||| | ||||||||| Sbjct 20862 CTTCACACCCTTTGCAGAGAGCTCTTTG 20835 Score = 86.0 bits (94), Expect = 4e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 24373 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 24314 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || | | |||| ||||| Sbjct 24313 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGAACATAG 24254 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | |||| || || ||||| ||||| Sbjct 24253 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 24219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 344647881975830