Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_002166.1 Length=40751 Score E Sequences producing significant alignments: (Bits) Value seq375765 691 0.0 seq409642 459 7e-125 seq237293 370 3e-98 >seq375765 Length=403 Score = 691 bits (766), Expect = 0.0 Identities = 395/403 (98%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 37344 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 37403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 37404 CGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTCTCGGCTTCGCCGG 37463 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 37464 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 37523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 37524 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGAAA 37583 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTAGAAA 164 Query 37584 TCAATAATCAACGTAAGGCGTTCCTCGATATGCTGGCATGGTCAGAGGGAACTGATAACG 37643 |||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| Sbjct 163 TCAATAATCAACGTAAGGGGTTCCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACG 104 Query 37644 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTCACTG 37703 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 103 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 44 Query 37704 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCCAA 37746 |||||||||||||||||||||||||||||||||||||||| || Sbjct 43 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 1 >seq409642 Length=345 Score = 459 bits (508), Expect = 7e-125 Identities = 257/259 (99%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 21634 AACTCAATGTTGGCCTGTATAGCTTCAGTGATTGCGATTCGCCTGTCTCGGCCTAATCCA 21693 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 87 AACTCAATGTTGGCCTGTATAGCTTCAGTGATTGCGATTCGCCTGTCTCTGCCTAATCCA 146 Query 21694 AACTCTTTACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGG 21753 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 147 AACTCTTTACCCGTCCTTGGGTCCCTGTAGCAGTAATATCCATTGTTTCTTATATAAAGG 206 Query 21754 TTAGGGGGTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAA 21813 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 207 TTAGGGGGTAAATCCCGGCGCTCATGACTTCGCCTTCTTCCCATTTCTGATCCTCTTCAA 266 Query 21814 AAGGCTACCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATA 21873 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 267 AAGGCCACCTGTTACTGGTCGATTTAAGTCAACCTTTACCGCTGATTCGTGGAACAGATA 326 Query 21874 CTCTCTTCCATCCTTAACC 21892 ||||||||||||||||||| Sbjct 327 CTCTCTTCCATCCTTAACC 345 >seq237293 Length=409 Score = 370 bits (410), Expect = 3e-98 Identities = 250/277 (90%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 33876 ATGAGGAAACTAACGTTTGAACTAAGAAGCCCCATC-CATCAGCAGAACGCCATTCAAGC 33934 |||| |||||||| |||||| | || | ||| | |||||||| ||||| ||||| || Sbjct 276 ATGAAAAAACTAACCTTTGAAATTCGAT-CTCCAGCACATCAGCAAAACGCTATTCACGC 218 Query 33935 CATCCAGCAAATCCTTCCAGACCCAACAAAACCAATCGTAGTAACCATTCAGGAGCGCAA 33994 | ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 217 AGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAACCATTCAGGAACGCAA 158 Query 33995 CCGCAGCTTAGACCAAAATCGGAAGCTTTGGGCTTGCCTTGGTGACGTCTCTCGTCAGGT 34054 |||||||||||||||||| |||||||| ||||| | | | |||| ||||||||||||||| Sbjct 157 CCGCAGCTTAGACCAAAACCGGAAGCTATGGGCCTTCTTAGGTGGCGTCTCTCGTCAGGT 98 Query 34055 TGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTTTACCGCAGCATT 34114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 97 TGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTTTACCGCAGCATT 38 Query 34115 AAAGCAGCAGGACGTTGTTCCTAACCTTGCCGGGAAT 34151 |||||||||||| |||||||||||||||||||||||| Sbjct 37 AAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129499669297614